Package index
-
SparseSpearmanCor2() - Sparse implementation of Spearman Correlation
-
SparsifiedRanks2() - Replace non-zero entries in a sparse matrix with non-zero ranks
-
betaDistance() - Calculate Dimensionally-adjusted correlation distances
-
centerBeta() - Center correlations
-
estimateShape() - Estimate parameters of a Beta distribution null model
-
euclidDistance() - Calculate Euclidean distance
-
interpolatedAdjacency() - Convert a (standardized) correlation value r to an adjacency
-
multiOmicModel() - Compute Spearman correlations and normalization distributions within and between multiple datasets
-
nullModelAdjacencyTable() - Compute soft threshold adjacency table for unsigned correlations from a symmetric Beta distribution null model
-
powerDistance() - Calculate power distance
-
sigmoidDistance() - Calculate sigmoid distance
-
standardizeFromModel() - Build a standardized correlation matrix using null models for each pair of component datasets